We had that smoking issue on acceration with the same 3.0L V6 turbodiesel engine - the OM642 - but in a Merc ML W164.
The crankcase breather diaphragm is part of the problem; when the rubber diaphragm in the PCV perishes or goes hard, the air pressure from the turbo intake sucks oil past that worn diaphragm, out of the crankcase, and into the turbo, creating a lot of black smoke on acceleration.
However, that is only half of the issue. The diaphram bolts onto an alloy breather cap on the cylinder head. That alloy cap itself has a plastic seal in it. That seal shrinks and hardens over time, allowing oil to seep past and into the crankcase breather and then on into the turbo intake.
It is a recognised issue with the OM642. The alloy cap should be replaced as a service item, along with the crankcase breather, and the two red turbo intake seals.
Part number of the alloy cap is A6420100131
It is an OEM only part. And costs about £30. We bought from
http://www.lllparts.co.uk who import at discount from MB warehouses in East Europe.
After replacing the cap, no more smoking, and we noticed improved fuel economy. Maybe an extra 3 or 4 mpg, and more power and smoother running.
A clear if long-winded video explaining: