It doesn't. It'll just breath easier and so get slightly more air pressure than previously, so it'll have to adjust the fuel/air ratio back to 14.7, as it'll go higher than that, running lean. The ECU will notice this via the maf and lamda sensor and richen it up again.
You'd need to tell the computer you've done the service it's asking for, but no need to reset anything. It'd be no different than driving up at high altitude (dirty air filter) and back down again (new one), everything adjusts automatically.