Just a quick update on this,
I disconnected the negative lead on the main battery under the bonnet.
This was disconnected for almost two days due to snow.
Reconnected today and done 50 miles (45 miles on the motorway).
Instantly I could tell the gearbox was smoother, no judder setting off from cold in 'C' 2nd.
Initially the rev flair was still there whilst on the motorway at a steady 60 - 70 mph, this got far better towards the end of the journey, almost to the point of struggling to make it do it near the end.
I had a short drive back home after coming off the motorway, the gearchange is much smoother, but still slight flair just as it changes gear 2nd to 3rd.
I hope the gearbox gets better over the coming days, but I am going to get the gearbox level checked and have the latest software uploaded.
This video below was the car on cruise control towards the end of the journey, last week the car would have been flairing about 200rpms at the same location.
This was coming up the long hill from Lancs to Yorkshire M62.
I accelerated very slightly, as you can see still some very slight rpm movement.